Creates a table of fishing mortalities by species group and gear for an
rsim.scenario() object.
Arguments
- Rsim.scenario
Scenario object that contains all of the rsim rates and forcing functions generated by
rsim.scenario().
Value
Returns a data table of F values for each species/gear combination.
- Group
Group/node
- Fishery/gearType
Gear type for the fishery
...
- Total
Sum over all gear types
See also
Other Rpath functions:
MTI(),
check.rpath.params(),
create.rpath.params(),
read.rpath.params(),
rpath(),
rpath.consumers(),
rpath.detrital(),
rpath.gears(),
rpath.groups(),
rpath.living(),
rpath.mixotrophs(),
rpath.producers(),
rpath.stanzas(),
stanzaplot(),
webplot(),
write.Rpath(),
write.rpath.params()
Examples
# Read in Rpath parameter file and generate balanced model
Rpath <- rpath(AB.params)
# Create a 50 yr Rsim scenario
Rsim.scenario <- rsim.scenario(Rpath, AB.params, years = 1:50)
rates <- frate.table(Rsim.scenario)
# display the head of the data frame
head(rates)
#> Group sealers trawlers seiners bait boats shrimpers Total
#> <char> <num> <num> <num> <num> <num> <num>
#> 1: seals 0.07389163 0.0000000 0.0000000 0.00000000 0.0000 0.07389163
#> 2: cod 0.00000000 0.1500000 0.0000000 0.00000000 0.0000 0.15000000
#> 3: whiting 0.00000000 0.1111111 0.0000000 0.00000000 0.0000 0.11111111
#> 4: mackerel 0.00000000 0.0000000 0.3333333 0.00000000 0.0000 0.33333333
#> 5: anchovy 0.00000000 0.0000000 0.1714286 0.02857143 0.0000 0.20000000
#> 6: shrimp 0.00000000 0.0000000 0.0000000 0.00000000 0.0625 0.06250000