Rpath inputs for a tutorial Rpath ecosystem.
Format
An unbalanced Rpath model object that contains:
- model
A data.table containing Ecopath unbalanced ecosystem parameters (base parameters and fisheries).
- diet
A data.table containing the Ecopath model's diet matrix.
- stanzas
Parameters for multistanza groups.
- pedigree
A data.table containing the data quality (pedigree) for the Ecopath model.
...
References
Lucey SM, Gaichas SK, Aydin KY (2020) Conducting reproducible ecosystem modeling using the open source mass balance model Rpath. Ecol Model 427:11. doi:10.1016/j.ecolmodel.2020.109057
See also
vignette("ModelSetup", package = "Rpath") for an example
of how to build this tutorial ecosystem.
Examples
# Balance the model
REco_bal <- rpath(REco.params)