Find the species itis

Filters the Summary data to find species stock information

Usage

get_species_itis(itis = NULL, stock = NULL)

Arguments

itis

Numeric vector. Species itis code (Default = NULL, all species)

stock

Vector. Either a character string or numeric in which to use to search for stock name or stock id

Value

data frame

stock_name

Full name of stock

jurisdiction

Management council

itis

species itis code

stock_id

stock id code

Examples

# Get ITIS info for Atlantic Cod, (ITIS code = 1647112)
get_species_itis(stock = "Atlantic cod")
#> # A tibble: 6 × 4
#>   stock_name                           jurisdiction   itis stock_id
#>   <chr>                                <chr>         <dbl>    <dbl>
#> 1 Atlantic cod - Eastern Georges Bank  NEFMC        164712    12805
#> 2 Atlantic cod - Eastern Gulf of Maine NEFMC        164712    17281
#> 3 Atlantic cod - Georges Bank          NEFMC        164712    10509
#> 4 Atlantic cod - Gulf of Maine         NEFMC        164712    10508
#> 5 Atlantic cod - Southern New England  NEFMC        164712    17282
#> 6 Atlantic cod - Western Gulf of Maine NEFMC        164712    17280
get_species_itis(stock = "cod")
#> # A tibble: 12 × 4
#>    stock_name                           jurisdiction   itis stock_id
#>    <chr>                                <chr>         <dbl>    <dbl>
#>  1 Atlantic cod - Eastern Georges Bank  NEFMC        164712    12805
#>  2 Atlantic cod - Eastern Gulf of Maine NEFMC        164712    17281
#>  3 Atlantic cod - Georges Bank          NEFMC        164712    10509
#>  4 Atlantic cod - Gulf of Maine         NEFMC        164712    10508
#>  5 Atlantic cod - Southern New England  NEFMC        164712    17282
#>  6 Atlantic cod - Western Gulf of Maine NEFMC        164712    17280
#>  7 Pacific cod - Aleutian Islands       NPFMC        164711    12745
#>  8 Pacific cod - Bering Sea             NPFMC        164711    12746
#>  9 Pacific cod - Gulf of Alaska         NPFMC        164711    10506
#> 10 Cowcod - Southern California         PFMC         166754    10443
#> 11 Lingcod - Northern Pacific Coast     PFMC         167116    12194
#> 12 Lingcod - Southern Pacific Coast     PFMC         167116    12195
get_species_itis(itis = 167712)
#> # A tibble: 0 × 4
#> # ℹ 4 variables: stock_name <chr>, jurisdiction <chr>, itis <dbl>,
#> #   stock_id <dbl>
# Get ITIS info for a specific cod stock
get_species_itis(stock = "12805")
#> # A tibble: 1 × 4
#>   stock_name                          jurisdiction   itis stock_id
#>   <chr>                               <chr>         <dbl>    <dbl>
#> 1 Atlantic cod - Eastern Georges Bank NEFMC        164712    12805
get_species_itis(stock = 12805)
#> # A tibble: 1 × 4
#>   stock_name                          jurisdiction   itis stock_id
#>   <chr>                               <chr>         <dbl>    <dbl>
#> 1 Atlantic cod - Eastern Georges Bank NEFMC        164712    12805