Combine all diagnostic output

Using the output from all tests (persistence, stability, reasonability), they are combined into a single data frame

diag_combine(persistence, stability, reasonability)

Arguments

persistence

Tibble. Output from diag_persistence

stability

Tibble. Output from diag_stability

reasonability

Tibble. Output from diag_reasonability

Value

A data frame

species

The common name of the species/functional group as described in Atlantis input file

code

Atlantis Code for species/functional group

persistence

Indicating pass or failure of persistence test

proportionInitBio

Metric for persistence. The proportion of initial biomass at tminimumBiomass

stability

Indicating pass or failure of stability test

relChange

Metric for stability. Rate of increase relative to t1Biomass(mtperyear/t1Biomass). see diag_stability

reasonability

Indicating pass or failure of reasonability test